Search results for "plant disease"

showing 10 items of 193 documents

The complete genome sequence of Lamium mild mosaic virus, a member of the genus Fabavirus

2013

Springer-Verlag Wien 2013 Abstract Lamium mild mosaic virus (LMMV) is the only one of the five members of the genus Fabavirus for which there are no nucleotide sequence data. In this study, the complete genome sequence of LMMV was determined and compared with the available complete genome sequences of other members of the genus Fabavirus. The genome was the largest of the genus but maintained the typical orga- nization, with RNA 1 of 6080 nucleotides (nt), RNA 2 of 4065 nt, and an unusually long 3 0 untranslated region in RNA 2 of 603 nt. Phylogenetic analysis of the amino acid sequences of the protease-polymerase (Pro-Pol) region and the two coat proteins confirmed that LMMV belongs to a d…

SubfamilyLMMVMolecular Sequence DataGenome ViralGenomeFabaviruBroad bean wilt virusViral ProteinsSpecies SpecificityGenusMosaic VirusesVirologySecoviridaeTobaccoComovirinaePhylogenyPlant DiseasesGeneticsWhole genome sequencingLamiaceaebiologyBase SequenceNucleic acid sequenceSettore AGR/12 - Patologia Vegetalefood and beveragesGeneral MedicineDNA-Directed RNA PolymerasesSequence Analysis DNAClassificationbiology.organism_classificationVirologyFabavirusRNA ViralCapsid ProteinsPeptide Hydrolases
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Role of Myzus persicae (Hemiptera: Aphididae) and its secondary hosts in plum pox virus propagation

2007

Plum pox virus (family Potyviridae, genus Potyvirus, PPV) is one of the most important viral pathogens of plants in the genus Prunus, particularly Prunus persica L. The role of the Myzus persicae (Sulzer) (Hemiptera: Aphididae) as a vector of PPV-M, and its role in spreading PPV-M, was investigated. PPV-M-infected peach trees were used as inoculum sources, and transmission to 15 herbaceous species commonly present in and around peach orchards was evaluated. The presence of PPV-M in secondary hosts after aphid transmission was verified by reverse transcription-polymerase chain reaction tests. The results indicate that Saponaria ocymoides L., Pisum sativum L., Trifolium repens L., Trifolium p…

Plum Pox VirusEcologyReverse Transcriptase Polymerase Chain ReactionAphidsInsect ScienceDisease Transmission InfectiousAnimalsBiological AssayPrunusGeneral MedicineInsect VectorsPlant Diseases
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Detection and identification Fabavirus species by one-step RT-PCR and multiplex RT-PCR

2014

The genus Fabavirus of the family Secoviridae comprises a group of poorly characterized viruses. To date, only five species have been described: Broad bean wilt virus 1 (BBWV-1), Broad bean wilt virus 2 (BBWV-2), Lamium mild mosaic virus (LMMV), Gentian mosaic virus (GeMV) and Cucurbit mild mosaic virus (CuMMV). The development is described of two RT-PCR procedures for the detection and identification of Fabavirus species: a one-step RT-PCR using a single pair of conserved primers for the detection of all fabaviruses, and a one-step multiplex RT-PCR using species-specific primers for the simultaneous detection and identification of the above-mentioned species of the genus Fabavirus. These m…

Time FactorsbiologyReverse Transcriptase Polymerase Chain ReactionBBWV-1 BBWV-2 GeMV CuMMV LMMV detection diagnosis multiplex RT-PCR conserved primersLamium mild mosaic virusSettore AGR/12 - Patologia VegetaleDetection Diagnosis Conserved primersbiology.organism_classificationSensitivity and SpecificityVirologyFabavirusBroad bean wilt virusReal-time polymerase chain reactionGenusVirologyPlant virusSecoviridaeRNA ViralIdentification (biology)MultiplexDNA PrimersPlant Diseases
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2017

The consequences of emerging marine diseases on the evolutionary trajectories of affected host populations in the marine realm are largely unexplored. Evolution in response to natural selection depends on the genetic variation of the traits under selection and the interaction of these traits with the environment (GxE). However, in the case of diseases, genotypes of pathogens add another dimension to this interaction. Therefore, the study of disease resistance needs to be extended to the interaction of host genotype, pathogen genotype and environment (GxGxE). In the present study we used a full-sib breeding design crossing two genetically differentiated populations of the Pacific oyster Cras…

0301 basic medicineBacterial diseaseNatural selectionbiologyEcologyfungiZoologyPlant disease resistancePacific oysterbiology.organism_classification03 medical and health sciences030104 developmental biologySympatric speciationGenetic variationGenotypeGeneticsGene–environment interactionGeneral Agricultural and Biological SciencesEcology Evolution Behavior and SystematicsEvolutionary Applications
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Viral fitness correlates with the magnitude and direction of the perturbation induced in the host’s transcriptome: the tobacco etch Potyvirus—tobacco…

2018

Determining the fitness of viral genotypes has become a standard practice in virology as it is essential to evaluate their evolutionary potential. Darwinian fitness, defined as the advantage of a given genotype with respect to a reference one, is a complex property that captures, in a single figure, differences in performance at every stage of viral infection. To what extent does viral fitness result from specific molecular interactions with host factors and regulatory networks during infection? Can we identify host genes in functional classes whose expression depends on viral fitness? Here, we compared the transcriptomes of tobacco plants infected with seven genotypes of tobacco etch potyv…

0301 basic medicinePotyvirusViral fitnessGene ExpressionBiologyReal-Time Polymerase Chain ReactionHost-virus interactionModels BiologicalTranscriptome03 medical and health sciencesDarwinian FitnessTobaccoGene expressionGeneticsTranscriptomicsGeneMolecular BiologyDiscoveriesEcology Evolution Behavior and SystematicsPlant DiseasesNicotiana tabacum PotyvirusGeneticsNicotiana tabacumPotyvirusresponse to infection Systems biologyPotyvirusRNAMicroarray Analysisbiology.organism_classificationResponse to infectionVirus evolutionRNA silencing030104 developmental biologyViral evolutionHost-Pathogen InteractionsTEVGenetic FitnessTranscriptomeSystems biologyHost–virus interaction
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Dynamic Precision Phenotyping Reveals Mechanism of Crop Tolerance to Root Herbivory.

2016

The western corn rootworm (WCR; Diabrotica virgifera virgifera LeConte) is a major pest of maize (Zea mays) that is well adapted to most crop management strategies. Breeding for tolerance is a promising alternative to combat WCR but is currently constrained by a lack of physiological understanding and phenotyping tools. We developed dynamic precision phenotyping approaches using 11C with positron emission tomography, root autoradiography, and radiometabolite flux analysis to understand maize tolerance to WCR. Our results reveal that WCR attack induces specific patterns of lateral root growth that are associated with a shift in auxin biosynthesis from indole-3-pyruvic acid to indole-3-aceton…

0106 biological sciences0301 basic medicineCrops AgriculturalIndolesPhysiologyGlutamineResearch Articles - Focus IssuePlant Science580 Plants (Botany)01 natural sciencesPlant RootsZea maysHost-Parasite InteractionsCrop03 medical and health sciencesBotanyGeneticsAnimalsCarbon RadioisotopesHerbivoryAmino AcidsPlant DiseasesHerbivorebiologyIndoleacetic AcidsMechanism (biology)Lateral rootfungifood and beveragesBiological Transportbiology.organism_classificationZea maysColeoptera030104 developmental biologyWestern corn rootwormPhenotypeAgronomyPositron-Emission TomographyPEST analysisFlux (metabolism)010606 plant biology & botanyPlant physiology
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Identifying Early Warning Signals for the Sudden Transition from Mild to Severe Tobacco Etch Disease by Dynamical Network Biomarkers

2019

This article belongs to the Special Issue The Complexity of the Potyviral Interaction Network.

0106 biological sciences0301 basic medicineComplex systemsSystems biologyPotyvirusDiseaseBiologytobacco etch virusSeverity of Illness Index01 natural sciencesArticlePlant VirusesTranscriptomeViral Proteins03 medical and health sciencesPlant-virus interactionpotyvirusGene Expression Regulation PlantVirologyProtein Interaction MappingTobaccoGene Regulatory NetworksProtein Interaction Mapscomplex systemsGenePlant DiseasesGeneticsTransition (genetics)Tobacco etch virusGene Expression Profilingsystems biologyDNBBiotic stressresponse to infectionbiology.organism_classificationplant-virus interactionTobacco etch virusphase transitionsprotein-protein interaction networks030104 developmental biologyInfectious DiseasesPhase transitionsHost-Pathogen InteractionsMutationBiomarker (medicine)BiomarkersSignal Transduction010606 plant biology & botanyViruses
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Discovery of a Major QTL Controlling Trichome IV Density in Tomato Using K-Seq Genotyping

2021

[EN] Trichomes are a common morphological defense against pests, in particular, type IV glandular trichomes have been associated with resistance against different invertebrates. Cultivated tomatoes usually lack or have a very low density of type IV trichomes. Therefore, for sustainable management of this crop, breeding programs could incorporate some natural defense mechanisms, such as those afforded by trichomes, present in certain Solanum species. We have identified a S. pimpinellifolium accession with very high density of this type of trichomes. This accession was crossed with a S. lycopersicum var. cerasiforme and a S. lycopersicum var. lycopersicum accessions, and the two resulting F2 …

0106 biological sciences0301 basic medicineGenotypelcsh:QH426-470QTLQuantitative Trait LociChromosome 9Genetic relationshiptomatoQuantitative trait locusMorfologia (Biologia)01 natural sciencesTomatoArticleTrichomes type IVCropK-seq03 medical and health sciencesSolanum lycopersicumGeneticsbiochemistryHumansGenotypingGenetics (clinical)Disease ResistancePlant DiseasesGeneticstrichomes type IVbiologyfungiGenètica vegetal<i>Solanum pimpinellifolium</i>Chromosome Mappingfood and beveragesSolanum pimpinellifoliumTrichomesbiology.organism_classificationSolanum pimpinellifoliumTrichomeGENETICAPlant Breedinglcsh:Genetics030104 developmental biologytrichomesSolanum010606 plant biology & botanyGenes
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Plant-associated microbiota as a source of antagonistic bacteria against the phytopathogen Erwinia amylovora.

2022

Control of bacterial plant diseases is a major concern, as they affect economically important species and spread easily, such as the case of fire blight of rosaceous caused by Erwinia amylovora. In the search for alternatives to the use of agrochemicals and antibiotics, this work presents a screening of natural bacterial antagonists of this relevant and devastating phytopathogen. We recovered bacterial isolates from different plant tissues and geographical origins and then selected those with the strongest ability to reduce fire blight symptoms ex vivo and remarkable in vitro antagonistic activity against E. amylovora. None of them elicited a hypersensitivity reaction in tobacco leaves, mos…

BacteriaMalusMicrobiotaRNA Ribosomal 16SErwinia amylovorafood and beveragesAgricultural and Biological Sciences (miscellaneous)Ecology Evolution Behavior and SystematicsPlant DiseasesEnvironmental microbiology reportsReferences
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Huanglongbing modifies quality components and flavonoid content of 'Valencia' oranges.

2014

BACKGROUND: In order to evaluate the effect of citrus greening disease, or Huanglongbing (HLB), on quality components and flavonoid contents of 'Valencia' oranges, fruit from non-infected trees (control), from infected trees but symptom-less (asymptomatic) and from infected trees and showing clear HLB symptoms (symptomatic) were harvested in March and in May, 2013. Fruit peel, pulp and juice were separated, the main quality components were determined, and hesperidin, nobiletin, tangeretin, narirutin and didymin were quantified using liquid chromatography. RESULTS: Peel colour, total soluble solids and citric acid were similar in control and asymptomatic fruits. Symptomatic fruits were small…

FlavonoidsBacteriaHesperidinCitrus greeningColorPeel colourNarirutinCitric AcidSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeFruit and Vegetable JuicesFruit pulpFruitJuice yieldNutrition and DieteticHumansFood ScienceCitrus sinensisPlant DiseasesJournal of the science of food and agriculture
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